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English: Meta-omics data based biogeochemical modeling.<be />

A schematic conceptual framework for global biogeochemical modeling from environmental, imaging, and meta-omics data (Sunagawa et al., 2015). A semi-automatic computational pipeline is schematized for combining biomarkers with biogeochemical data (Guidi et al., 2016) that can be incorporated into classic biogeochemical models (Guyennon et al., 2015) for creating a next generation of biogeochemical trait-based meta-omics models by considering their respective traits. Such novel meta-omics-enabled approaches aim to improve the monitoring and prediction of ocean processes while respecting the complexity of the planktonic system. For more information, see Louca et al. (2016) and Coles et al. (2017).

The biogeochemical model is taken from [1]

  • Sunagawa, S., Coelho, L. P., Chaffron, S., Kultima, J. R., Labadie, K., Salazar, G., et al. (2015). "Ocean plankton. Structure and function of the global ocean microbiome". Science, 348: 1261359. doi:10.1126/science.1261359.
  • Guidi, L., Chaffron, S., Bittner, L., Eveillard, D., Larhlimi, A., Roux, S., et al. (2016). "Plankton networks driving carbon export in the oligotrophic ocean". Nature, 532: 465–470. doi:10.1038/nature16942.
  • Guyennon, A., Baklouti, M., Diaz, F., Palmieri, J., Beuvier, J., Lebaupin-Brossier, C., et al. (2015). "New insights into the organic carbon export in the Mediterranean Sea from 3-D modelling". Biogeosciences, 11: 425–442. doi:10.5194/bg-12-7025-2015.
  • Louca, S., Parfrey, L. W., and Doebeli, M. (2016). "Decoupling function and taxonomy in the global ocean microbiome". Science, 353: 1272–1277. doi:10.1126/science.aaf4507.
  • Coles, V. J., Stukel, M. R., Brooks, M. T., Burd, A., Crump, B. C., Moran, M. A., et al. (2017). "Ocean biogeochemistry modeled with emergent trait-based genomics". Science, 358: 1149–1154. doi:10.1126/science.aan5712.
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https://www.frontiersin.org/articles/10.3389/fmars.2019.00623/full

doi:10.3389/fmars.2019.00623
Umwanditsi Antonietta Capotondi, Michael Jacox, Chris Bowler, Maria Kavanaugh, Patrick Lehodey and 26 others. Based on [2]

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Meta-omics data based biogeochemical modeling

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muri iki gihe09:53, 13 Kanama 2020Ifoto ntoya yikiciro nka 09:53, 13 Kanama 20203.094 × 3.884 (1,75 MB)Epipelagiclighten omic model
05:21, 16 Nyakanga 2020Ifoto ntoya yikiciro nka 05:21, 16 Nyakanga 20203.094 × 3.884 (783 KB)EpipelagicUploaded a work by Antonietta Capotondi, Michael Jacox, Chris Bowler, Maria Kavanaugh, Patrick Lehodey and 26 others. Based on [https://www.biogeosciences.net/12/7025/2015/] from https://www.frontiersin.org/articles/10.3389/fmars.2019.00623/full {{doi|10.3389/fmars.2019.00623}} with UploadWizard

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